Introduction
4
Nextflow fundamentals
Content:
Preface
1
Introduction
Data management
2
Folder structure
Conda
3
Conda environments
Docker
Apptainer
Introduction
4
Nextflow fundamentals
5
Processes
6
File management
7
Asyncronous channels
8
Operators
9
Configuration
10
Converting scripts to Nextflow
11
Nf-core
intro.html
12
Markdown basics
13
Reading in data
14
Summary
References
4
Nextflow fundamentals
Basic structure of Nextflow parts
Introduction
5
Processes